Translating the Foundational Model of Anatomy into OWL
نویسندگان
چکیده
منابع مشابه
Translating the Foundational Model of Anatomy into OWL
The Foundational Model of Anatomy (FMA) represents the result of manual and disciplined modeling of the structural organization of the human body. It is a tremendous resource in bioinformatics that facilitates sharing of information among applications that use anatomy knowledge. The FMA was developed in Protégé and the Protégé frames language is the canonical representation language for the FMA...
متن کاملThe Foundational Model of Anatomy in OWL: Experience and Perspectives
We present the method developed for migrating the Foundational Model of Anatomy (FMA) from its representation with frames in Protégé to its logical representation in OWL and our experience in reasoning with it. Despite the extensive use of metaclasses in Protégé, it proved possible to convert the FMA from Protégé into OWL DL, while capturing most of its original features. The conversion relies ...
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BACKGROUND The Foundational Model of Anatomy (FMA) is the reference ontology regarding human anatomy. FMA vocabulary was integrated into the Health Multi Terminological Portal (HMTP) developed by CISMeF based on the CISMeF Information System which also includes 26 other terminologies and controlled vocabularies, mainly in French. However, FMA is primarily in English. In this context, the transl...
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A description logics representation of the Foundational Model of Anatomy (FMA) in the Web Ontology Language (OWL-DL) would allow developers to combine it with other OWL ontologies, and would provide the benefit of being able to access generic reasoning tools. However, the FMA is currently represented in a frame language. The differences between description logics and frames are not only syntact...
متن کاملExperience in Reasoning with the Foundational Model of Anatomy in OWL DL
The objective of this study is to compare description logics (DLs) and frames for representing large-scale biomedical ontologies and reasoning with them. The ontology under investigation is the Foundational Model of Anatomy (FMA). We converted it from its frame-based representation in Protégé into OWL DL. The OWL reasoner Racer helped identify unsatisfiable classes in the FMA. Support for consi...
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ژورنال
عنوان ژورنال: Journal of Web Semantics
سال: 2008
ISSN: 1570-8268
DOI: 10.1016/j.websem.2007.12.001